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  5. Sobic.008G014801.1

Sobic.008G014801.1


Description : transcription factor *(TFIIIa)


Gene families : OG_42_0004901 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G014801.1
Cluster HCAA Clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Seita.1G117800.1 No alias transcription factor *(TFIIIa) 0.03 Orthogroups_2024-Update
Sobic.009G024400.1 No alias transcription factor *(TFIIIa) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 298 346
IPR013087 Znf_C2H2_type 651 675
IPR013087 Znf_C2H2_type 585 609
IPR002885 Pentatricopeptide_repeat 141 164
IPR002885 Pentatricopeptide_repeat 169 193
IPR002885 Pentatricopeptide_repeat 200 229
IPR002885 Pentatricopeptide_repeat 373 397
No external refs found!