Sobic.008G026600.1

Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex

Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.008G026600.1
Cluster	HCAA Clusters: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G058595	No alias	Phototropic-responsive NPH3 family protein	0.03	Orthogroups_2024-Update
Glyma.17G161600	No alias	Phototropic-responsive NPH3 family protein	0.04	Orthogroups_2024-Update
Pp1s108_69V6	No alias	protein binding	0.03	Orthogroups_2024-Update
Pp1s178_117V6	No alias	transposon mutator sub- expressed	0.02	Orthogroups_2024-Update
Pp1s340_40V6	No alias	transposon protein mutator sub-class	0.02	Orthogroups_2024-Update
Seita.8G012000.1	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase complex	0.04	Orthogroups_2024-Update
Sopen09g023980	No alias	NPH3 family	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR027356	NPH3_dom	211	466

External Links

No external refs found!