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  5. Sobic.008G030900.1

Sobic.008G030900.1


Description : Unknown function


Gene families : OG_42_0000142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G030900.1
Cluster HCAA Clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
A4A49_18039 No alias non-specific lipid-transfer protein ap10 0.03 Orthogroups_2024-Update
LOC_Os11g24070 No alias LTPL10 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
PSME_00005353-RA No alias (q43767|nlt41_horvu : 101.0) Nonspecific lipid-transfer... 0.02 Orthogroups_2024-Update
PSME_00005354-RA No alias (q43767|nlt41_horvu : 97.4) Nonspecific lipid-transfer... 0.02 Orthogroups_2024-Update
Potri.016G135400 No alias lipid transfer protein 1 0.02 Orthogroups_2024-Update
Seita.7G301100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G013600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 30 115
No external refs found!