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  5. Sobic.008G033300.1

Sobic.008G033300.1


Description : cation


Gene families : OG_42_0000842 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G033300.1
Cluster HCAA Clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g42910 No alias sodium/calcium exchanger protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G396400.1 No alias cation 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 339 488
IPR004837 NaCa_Exmemb 46 187
No external refs found!