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  5. Sobic.008G033700.2

Sobic.008G033700.2


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G033700.2
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
424638 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
A4A49_10346 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_13046 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_33262 No alias abc transporter g family member 32 0.03 Orthogroups_2024-Update
A4A49_38659 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
At1g66950 No alias ABC transporter G family member 39... 0.02 Orthogroups_2024-Update
Cre16.g655450 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.10G203000 No alias pleiotropic drug resistance 11 0.05 Orthogroups_2024-Update
Glyma.15G011900 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.20G187400 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU5Hr1G049460.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G019080.19 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Kfl00361_0030 kfl00361_0030_v1.1 (q5z9s8|pdr12_orysa : 1282.0) Pleiotropic drug... 0.01 Orthogroups_2024-Update
LOC_Os02g11760 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g13720 No alias Plant PDR ABC transporter associated domain containing... 0.02 Orthogroups_2024-Update
MA_10437002g0020 No alias (at1g59870 : 558.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00000647-RA No alias (at1g59870 : 1668.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00041754-RA No alias (q949g3|pdr1_nicpl : 474.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.001G048800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.006G248500 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Potri.008G024400 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.5G125600.1 No alias cuticular lipid exporter *(PEC1) & subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.9G187800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc09g091660 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g007290 No alias No description available 0.03 Orthogroups_2024-Update
Sopen05g032120 No alias ABC-2 type transporter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1210 1426
IPR013525 ABC_2_trans 559 770
IPR029481 ABC_trans_N 147 196
IPR003439 ABC_transporter-like 913 1065
IPR003439 ABC_transporter-like 222 405
IPR013581 PDR_assoc 775 837
No external refs found!