Sobic.008G043900.2

Description : bZIP class-A transcription factor

Gene families : OG_42_0000858 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.008G043900.2
Cluster	HCAA Clusters: Cluster_280

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.A00415.1	No alias	bZIP class-A transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G478417	No alias	ABRE binding factor 4	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
BP	GO:0009606	tropism	IEP	Predicted GO
MF	GO:0009916	alternative oxidase activity	IEP	Predicted GO
BP	GO:0010274	hydrotropism	IEP	Predicted GO
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004827	bZIP	271	311

External Links

No external refs found!