1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.008G047000.1

Sobic.008G047000.1


Description : actin filament protein


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G047000.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_33830 No alias actin 0.03 Orthogroups_2024-Update
At2g42100 No alias Putative actin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC2] 0.02 Orthogroups_2024-Update
Bradi4g41850 No alias actin 7 0.04 Orthogroups_2024-Update
Brara.A02909.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
GRMZM2G006765 No alias actin 7 0.04 Orthogroups_2024-Update
Glyma.02G172800 No alias actin 1 0.03 Orthogroups_2024-Update
Glyma.03G144800 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.04G215900 No alias actin 7 0.05 Orthogroups_2024-Update
Glyma.09G111200 No alias actin 1 0.04 Orthogroups_2024-Update
Glyma.11G139800 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.12G063400 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.13G335600 No alias actin-11 0.02 Orthogroups_2024-Update
Glyma.19G000900 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.19G147900 No alias actin 7 0.05 Orthogroups_2024-Update
HORVU1Hr1G047440.5 No alias actin filament protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G039850.3 No alias actin filament protein 0.04 Orthogroups_2024-Update
LOC_Os10g36650 No alias actin, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G309500 No alias actin 7 0.03 Orthogroups_2024-Update
Pp1s337_21V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.7G294000.1 No alias actin filament protein 0.08 Orthogroups_2024-Update
Seita.8G043100.1 No alias actin filament protein 0.05 Orthogroups_2024-Update
Solyc04g011500 No alias actin 0.04 Orthogroups_2024-Update
Solyc10g080500 No alias actin 0.03 Orthogroups_2024-Update
Sopen04g005680 No alias Actin 0.04 Orthogroups_2024-Update
Sopen10g031050 No alias Actin 0.03 Orthogroups_2024-Update
evm.model.contig_3739.1 No alias (p53498|act_chlre : 579.0) Actin - Chlamydomonas... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!