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  5. Sobic.008G055700.2

Sobic.008G055700.2


Description : MYB class-R2R3 subgroup-4 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G055700.2
Cluster HCAA Clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
A4A49_00094 No alias transcription factor myb108 0.04 Orthogroups_2024-Update
A4A49_41919 No alias myb-related protein myb4 0.02 Orthogroups_2024-Update
At1g63910 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0] 0.04 Orthogroups_2024-Update
At2g26960 No alias Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1] 0.02 Orthogroups_2024-Update
At3g61250 No alias Transcription factor MYB41... 0.04 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.02 Orthogroups_2024-Update
Bradi2g04252 No alias myb domain protein 50 0.02 Orthogroups_2024-Update
Brara.A01549.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.02 Orthogroups_2024-Update
Brara.B01349.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.02 Orthogroups_2024-Update
Brara.C01184.1 No alias MYB class-R2R3 subgroup-14 transcription factor &... 0.02 Orthogroups_2024-Update
Brara.C01651.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.C02447.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.E03665.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03210.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I02176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.J01962.1 No alias MYB class-R2R3 subgroup-8 transcription factor &... 0.03 Orthogroups_2024-Update
GRMZM2G070849 No alias myb domain protein 112 0.05 Orthogroups_2024-Update
GRMZM2G124715 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.05G211200 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.06G299900 No alias myb domain protein 14 0.02 Orthogroups_2024-Update
Glyma.07G073000 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.07G235900 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.06 Orthogroups_2024-Update
Glyma.10G236400 No alias myb domain protein 17 0.05 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.04 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G060650.6 No alias accessory protein (LMI2) of floral meristem identity control 0.04 Orthogroups_2024-Update
LOC_Os01g49160 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g38740 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g45060 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10432903g0010 No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.05 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.02 Orthogroups_2024-Update
MA_190973g0010 No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
MA_308669g0010 No alias (p20025|myb38_maize : 236.0) Myb-related protein Zm38 -... 0.02 Orthogroups_2024-Update
PSME_00018833-RA No alias (p20025|myb38_maize : 246.0) Myb-related protein Zm38 -... 0.02 Orthogroups_2024-Update
PSME_00026452-RA No alias (at3g61250 : 251.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.06 Orthogroups_2024-Update
PSME_00031962-RA No alias (at4g13480 : 170.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.07 Orthogroups_2024-Update
PSME_00037500-RA No alias (p20025|myb38_maize : 252.0) Myb-related protein Zm38 -... 0.04 Orthogroups_2024-Update
PSME_00039195-RA No alias (at5g57620 : 239.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00050182-RA No alias (p10290|mybc_maize : 191.0) Anthocyanin regulatory C1... 0.02 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.04 Orthogroups_2024-Update
PSME_00050866-RA No alias (at1g22640 : 150.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.003G079100 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Potri.003G189700 No alias myb domain protein 33 0.02 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Potri.007G067600 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.04 Orthogroups_2024-Update
Seita.1G209100.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.05 Orthogroups_2024-Update
Seita.3G142100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G239300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G283200.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G204400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G390800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G432200.1 No alias MYB class-R2R3 subgroup-7 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G544000.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G196000.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.06 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G232800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G216900.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g057910 No alias R2R3MYB transcription factor 2 0.03 Orthogroups_2024-Update
Solyc02g082040 No alias R2R3MYB transcription factor 56 0.04 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g028000 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 108 152
IPR001005 SANT/Myb 55 102
No external refs found!