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  5. Sobic.008G064700.1

Sobic.008G064700.1


Description : GDP-L-galactose phosphorylase *(VTC2/5)


Gene families : OG_42_0002848 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G064700.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
99090 No alias mannose-1-phosphate guanylyltransferase... 0.02 Orthogroups_2024-Update
A4A49_18864 No alias gdp-l-galactose phosphorylase 1 0.03 Orthogroups_2024-Update
At5g55120 No alias VTC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UIM1] 0.06 Orthogroups_2024-Update
Brara.A01670.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.05 Orthogroups_2024-Update
Brara.K00119.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.03 Orthogroups_2024-Update
Glyma.02G292800 No alias mannose-1-phosphate guanylyltransferase... 0.03 Orthogroups_2024-Update
HORVU4Hr1G017030.2 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.03 Orthogroups_2024-Update
MA_56912g0020 No alias (at4g26850 : 514.0) Encodes a novel protein involved in... 0.03 Orthogroups_2024-Update
Potri.011G087200 No alias mannose-1-phosphate guanylyltransferase... 0.03 Orthogroups_2024-Update
Pp1s114_207V6 No alias F10M23.190; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.7G278400.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.06 Orthogroups_2024-Update
Solyc06g073320 No alias GDP-L-galactose phosphorylase 1 (AHRD V3.3 *** AT4G26850.1) 0.02 Orthogroups_2024-Update
Sopen06g029690 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!