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  5. Sobic.008G075900.1

Sobic.008G075900.1


Description : E3 ubiquitin ligase *(SINA)


Gene families : OG_42_0000590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000590_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G075900.1
Cluster HCAA Clusters: Cluster_409

Target Alias Description ECC score Gene Family Method Actions
Bradi2g01770 No alias Protein with RING/U-box and TRAF-like domains 0.05 Orthogroups_2024-Update
Sobic.009G047700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA 16Dec
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA 16Dec
BP GO:0007275 multicellular organism development IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 133 203
No external refs found!