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Description : E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)
Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.008G088806.1 | |
| Cluster | HCAA Clusters: Cluster_110 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi4g39040 | No alias | RING domain ligase2 | 0.03 | Orthogroups_2024-Update | |
| Brara.I03047.1 | No alias | E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G115700 | No alias | RING domain ligase2 | 0.02 | Orthogroups_2024-Update | |
| PSME_00008345-RA | No alias | (at5g14420 : 257.0) RING domain ligase2 (RGLG2);... | 0.03 | Orthogroups_2024-Update | |
| Pp1s30_112V6 | No alias | rglg2 (ring domain ligase2) ubiquitin-protein ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.2G130600.1 | No alias | E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G461100.1 | No alias | E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) | 0.03 | Orthogroups_2024-Update | |
| Solyc03g111870 | No alias | E3 ubiquitin-protein ligase RGLG2 (AHRD V3.3 ***... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004470 | malic enzyme activity | IEP | Predicted GO |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
| BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
| BP | GO:0006479 | protein methylation | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| MF | GO:0016151 | nickel cation binding | IEP | Predicted GO |
| BP | GO:0016571 | histone methylation | IEP | Predicted GO |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
| BP | GO:0019627 | urea metabolic process | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
| CC | GO:0035550 | urease complex | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| BP | GO:0043419 | urea catabolic process | IEP | Predicted GO |
| BP | GO:0043605 | cellular amide catabolic process | IEP | Predicted GO |
| BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| MF | GO:0051287 | NAD binding | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010734 | Copine | 245 | 459 |
| No external refs found! |