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  5. Sobic.008G101000.1

Sobic.008G101000.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G101000.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G030000 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.02G184300 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G139950 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G126380.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g63200 No alias powdery mildew resistance protein PM3b, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g12740 No alias disease resistance protein RGA3, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g20030 No alias disease resistance RPP13-like protein 1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g10570 No alias NBS-LRR disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G194850 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.004G195200 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.006G275800 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Seita.2G011300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.8G234500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen08g024640 No alias NB-ARC domain 0.04 Orthogroups_2024-Update
Sopen09g025780 No alias NB-ARC domain 0.02 Orthogroups_2024-Update
Sopen11g021420 No alias NB-ARC domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 173 411
No external refs found!