Description : component *(uS14) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0002354 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002354_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.008G108601.1 | |
Cluster | HCAA Clusters: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
171412 | No alias | Ribosomal protein S14p/S29e family protein | 0.08 | Orthogroups_2024-Update | |
At3g44010 | No alias | Ribosomal protein S14p/S29e family protein... | 0.06 | Orthogroups_2024-Update | |
At4g33865 | No alias | 40S ribosomal protein S29... | 0.04 | Orthogroups_2024-Update | |
Brara.A00423.1 | No alias | component *(uS14) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Cre08.g358556 | No alias | Ribosomal protein S14p/S29e family protein | 0.17 | Orthogroups_2024-Update | |
HORVU4Hr1G037800.1 | No alias | component *(uS14) of small ribosomal-subunit (SSU) proteome | 0.17 | Orthogroups_2024-Update | |
LOC_Os11g41610 | No alias | 40S ribosomal protein S29, putative, expressed | 0.05 | Orthogroups_2024-Update | |
MA_10436379g0010 | No alias | (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... | 0.03 | Orthogroups_2024-Update | |
MA_336247g0010 | No alias | (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... | 0.05 | Orthogroups_2024-Update | |
Mp5g15120.1 | No alias | component RPS29 of SSU proteome | 0.02 | Orthogroups_2024-Update | |
PSME_00033957-RA | No alias | (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... | 0.1 | Orthogroups_2024-Update | |
PSME_00037160-RA | No alias | (at4g33865 : 113.0) Ribosomal protein S14p/S29e family... | 0.07 | Orthogroups_2024-Update | |
Potri.009G090000 | No alias | Ribosomal protein S14p/S29e family protein | 0.05 | Orthogroups_2024-Update | |
Potri.014G017701 | No alias | Ribosomal protein S14p/S29e family protein | 0.04 | Orthogroups_2024-Update | |
Pp1s58_94V6 | No alias | 40s ribosomal protein s29 | 0.17 | Orthogroups_2024-Update | |
Pp1s79_7V6 | No alias | 40s ribosomal protein s29 | 0.14 | Orthogroups_2024-Update | |
Solyc06g073430 | No alias | Ribosomal protein S3 (AHRD V3.3 --* A0A0K1ZDA3_9SOLA) | 0.14 | Orthogroups_2024-Update | |
Solyc11g020890 | No alias | 40S ribosomal S29-like protein (AHRD V3.3 *** A0A0B0MKW3_GOSAR) | 0.1 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006952 | defense response | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
BP | GO:0009607 | response to biotic stimulus | IEP | Predicted GO |
BP | GO:0009617 | response to bacterium | IEP | Predicted GO |
BP | GO:0009620 | response to fungus | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042742 | defense response to bacterium | IEP | Predicted GO |
BP | GO:0043207 | response to external biotic stimulus | IEP | Predicted GO |
BP | GO:0050832 | defense response to fungus | IEP | Predicted GO |
BP | GO:0051704 | multi-organism process | IEP | Predicted GO |
BP | GO:0051707 | response to other organism | IEP | Predicted GO |
BP | GO:0098542 | defense response to other organism | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001209 | Ribosomal_S14 | 42 | 91 |
No external refs found! |