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  5. Sobic.008G112200.1

Sobic.008G112200.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G112200.1
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
109587 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
A4A49_00243 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.05 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.03 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.02 Orthogroups_2024-Update
At1g25340 No alias myb domain protein 116 [Source:TAIR;Acc:AT1G25340] 0.03 Orthogroups_2024-Update
At1g63910 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0] 0.02 Orthogroups_2024-Update
At2g32460 No alias Transcription factor MYB101... 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.03 Orthogroups_2024-Update
At3g06490 No alias Transcription factor MYB108... 0.03 Orthogroups_2024-Update
At3g13890 No alias Transcription factor MYB26... 0.05 Orthogroups_2024-Update
At4g17785 No alias Transcription factor MYB39... 0.03 Orthogroups_2024-Update
At5g12870 No alias Transcription factor MYB46... 0.04 Orthogroups_2024-Update
At5g23000 No alias Transcription factor RAX1... 0.04 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.02 Orthogroups_2024-Update
Bradi1g64140 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi2g17280 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Bradi2g24400 No alias myb domain protein 6 0.04 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
Bradi2g62510 No alias myb domain protein 59 0.01 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Bradi3g36370 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Bradi3g36660 No alias myb domain protein 106 0.01 Orthogroups_2024-Update
Bradi3g38807 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Brara.B01779.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03345.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.E00806.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Brara.E03277.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.F02919.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02641.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03164.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.I00299.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00351.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01367.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.I03072.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.J01962.1 No alias MYB class-R2R3 subgroup-8 transcription factor &... 0.03 Orthogroups_2024-Update
GRMZM2G003406 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.02 Orthogroups_2024-Update
GRMZM2G143046 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G167829 No alias myb domain protein 87 0.02 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G419239 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Glyma.02G013900 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Glyma.02G110100 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Glyma.06G312900 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Glyma.10G014600 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Glyma.10G165800 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.12G106400 No alias MYB-like 102 0.04 Orthogroups_2024-Update
Glyma.13G303200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.15G264000 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.17G085600 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.18G230600 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.19G055800 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU0Hr1G005100.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G017970.4 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G084170.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G027580.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G087990.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G023510.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G057410.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g07450 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g02370 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os03g04900 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g14670 No alias ODORANT1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g44090 No alias myb-related protein Hv33, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_101790g0010 No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_128244g0010 No alias (at3g61250 : 275.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_33964g0010 No alias (at5g16600 : 262.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.02 Orthogroups_2024-Update
PSME_00004490-RA No alias "(at2g47460 : 180.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.03 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.04 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00019912-RA No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.01 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00050636-RA No alias (p20025|myb38_maize : 262.0) Myb-related protein Zm38 -... 0.05 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052193-RA No alias (at5g65790 : 223.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.03 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.002G038500 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Potri.004G086300 No alias myb domain protein 43 0.02 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Potri.005G112000 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.007G093900 No alias myb domain protein 92 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.010G174500 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.012G140500 No alias myb domain protein 19 0.02 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Potri.014G081200 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.02 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.02 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Potri.019G036400 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Potri.019G118700 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Pp1s317_55V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.02 Orthogroups_2024-Update
Seita.1G209100.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.1G324800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.01 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Seita.5G028900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G030000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G284800.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.03 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G275500.3 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G183800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G232800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G274000.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.05 Orthogroups_2024-Update
Sobic.004G191800.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G273800.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.01 Orthogroups_2024-Update
Sobic.005G217200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G032000.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.06 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc02g067340 No alias R2R3MYB transcription factor 96 0.03 Orthogroups_2024-Update
Solyc03g059200 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRF2_SALMI) 0.03 Orthogroups_2024-Update
Solyc03g112390 No alias R2R3MYB transcription factor 86 0.02 Orthogroups_2024-Update
Solyc06g005330 No alias R2R3MYB transcription factor 59 0.03 Orthogroups_2024-Update
Solyc07g008010 No alias R2R3MYB transcription factor 82 0.02 Orthogroups_2024-Update
Solyc07g054840 No alias R2R3MYB transcription factor 41 0.02 Orthogroups_2024-Update
Solyc08g081500 No alias LETHM1 0.02 Orthogroups_2024-Update
Solyc10g008700 No alias R2R3MYB transcription factor 49 0.02 Orthogroups_2024-Update
Sopen01g006750 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen04g006600 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g004090 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g018710 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g025260 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 26 73
IPR001005 SANT/Myb 79 122
No external refs found!