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  5. Sobic.008G114700.1

Sobic.008G114700.1


Description : Unknown function


Gene families : OG_42_0000175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G114700.1
Cluster HCAA Clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
A4A49_22317 No alias peroxidase 3 0.02 Orthogroups_2024-Update
At4g11290 No alias Peroxidase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT2] 0.03 Orthogroups_2024-Update
Brara.J00345.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G135000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G003200.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA 16Dec
BP GO:0006979 response to oxidative stress IEA 16Dec
MF GO:0020037 heme binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase_pln/fun/bac 63 311
No external refs found!