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  5. Sobic.008G114900.1

Sobic.008G114900.1


Description : ROP-activating protein *(RopGAP)


Gene families : OG_42_0000700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G114900.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G323936 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 Orthogroups_2024-Update
HORVU3Hr1G113170.1 No alias ROP-activating protein *(RopGAP) 0.06 Orthogroups_2024-Update
MA_10436113g0010 No alias (at4g03100 : 397.0) Rho GTPase activating protein with... 0.03 Orthogroups_2024-Update
Seita.7G326700.1 No alias ROP-activating protein *(RopGAP) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 154 288
IPR000095 CRIB_dom 91 120
No external refs found!