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  5. Sobic.008G119400.1

Sobic.008G119400.1


Description : RALF/RALFL precursor polypeptide


Gene families : OG_42_0000460 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G119400.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_10920 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g28270 No alias Protein RALF-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZA0] 0.02 Orthogroups_2024-Update
Brara.J00141.1 No alias RALF/RALFL precursor polypeptide 0.03 Orthogroups_2024-Update
HORVU2Hr1G118830.2 No alias RALF/RALFL precursor polypeptide 0.03 Orthogroups_2024-Update
MA_10119624g0010 No alias (at4g15800 : 97.1) Member of a diversely expressed... 0.03 Orthogroups_2024-Update
MA_1059g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_1059g0020 No alias (at3g05490 : 102.0) Member of a diversely expressed... 0.02 Orthogroups_2024-Update
Seita.3G072800.1 No alias RALF/RALFL precursor polypeptide 0.03 Orthogroups_2024-Update
Sobic.003G415400.1 No alias RALF/RALFL precursor polypeptide 0.02 Orthogroups_2024-Update
Sobic.009G075400.1 No alias RALF/RALFL precursor polypeptide 0.02 Orthogroups_2024-Update
Sopen01g029860 No alias Rapid ALkalinization Factor (RALF) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008801 RALF 68 126
No external refs found!