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  5. Sobic.008G123300.1

Sobic.008G123300.1


Description : Unknown function


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G123300.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
At1g50140 No alias p-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Brara.I01352.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00055_0110 kfl00055_0110_v1.1 (at4g02480 : 607.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Kfl00129_0010 kfl00129_0010_v1.1 (at4g02480 : 322.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000253 FHA_dom 75 142
IPR003959 ATPase_AAA_core 666 795
No external refs found!