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  5. Sobic.008G134100.3

Sobic.008G134100.3


Description : Unknown function


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G134100.3
Cluster HCAA Clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Bradi1g57167 No alias F-box associated ubiquitination effector family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G085120.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0018142 protein-DNA covalent cross-linking IEP Predicted GO
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 42
No external refs found!