1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.008G139900.1

Sobic.008G139900.1


Description : regulatory factor *(RIQ) of thylakoid grana stacking


Gene families : OG_42_0008260 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008260_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G139900.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
415599 No alias Protein of unknown function (DUF1118) 0.03 Orthogroups_2024-Update
Brara.C00324.1 No alias regulatory factor *(RIQ) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
Glyma.04G161600 No alias Protein of unknown function (DUF1118) 0.02 Orthogroups_2024-Update
Glyma.06G204200 No alias Protein of unknown function (DUF1118) 0.05 Orthogroups_2024-Update
LOC_Os12g38640 No alias expressed protein 0.04 Orthogroups_2024-Update
Mp1g29140.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Potri.015G058600 No alias Protein of unknown function (DUF1118) 0.04 Orthogroups_2024-Update
Pp1s43_120V6 No alias at5g08050 f13g24_250 0.03 Orthogroups_2024-Update
Seita.3G324600.1 No alias regulatory factor *(RIQ) of thylakoid grana stacking 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009500 DUF1118 89 200
No external refs found!