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  5. Sobic.008G159100.1

Sobic.008G159100.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G159100.1
Cluster HCAA Clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
107557 No alias calmodulin 5 0.02 Orthogroups_2024-Update
141966 No alias calmodulin 5 0.03 Orthogroups_2024-Update
A4A49_24311 No alias calmodulin-like protein 8 0.03 Orthogroups_2024-Update
GRMZM2G146720 No alias calmodulin 5 0.02 Orthogroups_2024-Update
GRMZM2G395244 No alias calmodulin 5 0.02 Orthogroups_2024-Update
GRMZM2G444621 No alias calmodulin-like 11 0.03 Orthogroups_2024-Update
Kfl00734_0010 kfl00734_0010_v1.1 (at3g43810 : 285.0) EF hand domain protein encodes a... 0.02 Orthogroups_2024-Update
Potri.008G159300 No alias calmodulin-like 11 0.02 Orthogroups_2024-Update
Potri.013G040300 No alias calmodulin-like 11 0.05 Orthogroups_2024-Update
Seita.9G097000.1 No alias calcium sensor *(CML) 0.06 Orthogroups_2024-Update
Sobic.001G390300.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.03 Orthogroups_2024-Update
Solyc06g053930 No alias Calmodulin, putative (AHRD V3.3 *** B9RTI5_RICCO) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 11 73
IPR002048 EF_hand_dom 97 159
No external refs found!