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  5. Sobic.008G166100.3

Sobic.008G166100.3


Description : Unknown function


Gene families : OG_42_0001207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G166100.3
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
PSME_00040899-RA No alias (at5g14480 : 578.0)... 0.02 Orthogroups_2024-Update
Seita.3G386900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.006G120500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen07g003910 No alias Glycosyltransferase family 17 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA 16Dec
BP GO:0006487 protein N-linked glycosylation IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR006813 Glyco_trans_17 17 362
No external refs found!