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  5. Sobic.008G173800.2

Sobic.008G173800.2


Description : proton


Gene families : OG_42_0001672 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001672_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G173800.2
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
At4g04850 No alias K(+) efflux antiporter 3, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi4g01430 No alias K+ efflux antiporter 3 0.04 Orthogroups_2024-Update
Glyma.08G064600 No alias K+ efflux antiporter 3 0.04 Orthogroups_2024-Update
HORVU2Hr1G124210.9 No alias proton 0.03 Orthogroups_2024-Update
Potri.009G080800 No alias K+ efflux antiporter 3 0.03 Orthogroups_2024-Update
Pp1s114_83V6 No alias glutathione-regulated potassium-efflux system protein 0.02 Orthogroups_2024-Update
Pp1s16_337V6 No alias glutathione-regulated potassium-efflux system protein 0.03 Orthogroups_2024-Update
Pp1s262_91V6 No alias glutathione-regulated potassium-efflux system protein 0.02 Orthogroups_2024-Update
Pp1s2_217V6 No alias glutathione-regulated potassium-efflux system protein 0.02 Orthogroups_2024-Update
Seita.3G011200.1 No alias proton 0.04 Orthogroups_2024-Update
Seita.3G390600.1 No alias proton 0.06 Orthogroups_2024-Update
Sopen11g019710 No alias Sodium/hydrogen exchanger family 0.02 Orthogroups_2024-Update
evm.model.contig_4440.1 No alias (at4g04850 : 347.0) member of Putative potassium... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA 16Dec
BP GO:0006813 potassium ion transport IEA 16Dec
MF GO:0015299 solute:proton antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 89 474
IPR003148 RCK_N 506 629
No external refs found!