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  5. Sobic.008G179400.1

Sobic.008G179400.1


Description : Unknown function


Gene families : OG_42_0000140 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G179400.1
Cluster HCAA Clusters: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g24840 No alias ankyrin repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.019G107200 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Seita.8G076600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G179000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g061740 No alias Ankyrin repeat-containing-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 401 500
IPR002110 Ankyrin_rpt 235 325
IPR002110 Ankyrin_rpt 109 188
IPR002110 Ankyrin_rpt 40 93
No external refs found!