1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.008G180800.1

Sobic.008G180800.1


Description : phytoene synthase *(PSY) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG_42_0001912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G180800.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At5g17230 No alias PHYTOENE SYNTHASE [Source:UniProtKB/TrEMBL;Acc:F4KGX7] 0.03 Orthogroups_2024-Update
Bradi1g29590 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Bradi4g01100 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Cre02.g095092 No alias PHYTOENE SYNTHASE 0.01 Orthogroups_2024-Update
GRMZM2G149317 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Glyma.02G240200 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Glyma.02G283400 No alias PHYTOENE SYNTHASE 0.07 Orthogroups_2024-Update
Glyma.14G031200 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
HORVU5Hr1G005740.2 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
LOC_Os12g43130 No alias phytoene synthase, chloroplast precursor, putative, expressed 0.04 Orthogroups_2024-Update
MA_86494g0010 No alias (at5g17230 : 553.0) Encodes phytoene synthase.; PHYTOENE... 0.02 Orthogroups_2024-Update
Potri.005G205800 No alias PHYTOENE SYNTHASE 0.04 Orthogroups_2024-Update
Pp1s323_70V6 No alias phytoene synthase 0.04 Orthogroups_2024-Update
Seita.3G397800.1 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.1 Orthogroups_2024-Update
Solyc02g081330 No alias phytoene synthase 2 0.04 Orthogroups_2024-Update
Sopen02g025960 No alias Squalene/phytoene synthase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002060 Squ/phyt_synthse 124 379
No external refs found!