Sobic.008G191100.1


Description : UMF23-type solute transporter


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G191100.1
Cluster HCAA Clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Bradi1g54990 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Kfl00098_0310 kfl00098_0310_v1.1 (at5g14120 : 358.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
MA_116104g0010 No alias (at2g39210 : 585.0) Major facilitator superfamily... 0.02 Orthogroups_2024-Update
PSME_00034985-RA No alias (at2g39210 : 444.0) Major facilitator superfamily... 0.02 Orthogroups_2024-Update
Potri.002G133900 No alias Nodulin-like / Major Facilitator Superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G139000.1 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
Solyc06g011590 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G28120.1) 0.03 Orthogroups_2024-Update
Sopen03g029970 No alias Nodulin-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 11 258
IPR011701 MFS 321 514
No external refs found!