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  5. Sobic.009G005900.1

Sobic.009G005900.1


Description : actin filament protein


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G005900.1
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Bradi2g39590 No alias actin 7 0.02 Orthogroups_2024-Update
GRMZM2G047055 No alias actin-11 0.04 Orthogroups_2024-Update
GRMZM2G126010 No alias actin 7 0.03 Orthogroups_2024-Update
Glyma.18G290800 No alias actin-11 0.02 Orthogroups_2024-Update
MA_1964g0010 No alias (o81221|act_goshi : 729.0) Actin - Gossypium hirsutum... 0.03 Orthogroups_2024-Update
Sobic.009G153000.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Solyc11g005330 No alias Actin (AHRD V3.3 *** ACT_GOSHI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 332
No external refs found!