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  5. Sobic.009G008800.1

Sobic.009G008800.1


Description : C1-class subclass RD21/XCP thiol protease & Prgrammed Cell Death cysteine protease *(XCP) & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G008800.1
Cluster HCAA Clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G028300 No alias xylem bark cysteine peptidase 3 0.02 Orthogroups_2024-Update
Glyma.14G085800 No alias Granulin repeat cysteine protease family protein 0.02 Orthogroups_2024-Update
Glyma.16G095900 No alias Granulin repeat cysteine protease family protein 0.04 Orthogroups_2024-Update
LOC_Os01g73980 No alias xylem cysteine proteinase 2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g01810 No alias xylem cysteine proteinase 2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
Seita.3G067600.1 No alias C1-class subclass RD21/XCP thiol protease & Prgrammed... 0.03 Orthogroups_2024-Update
Sopen12g030570 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008234 cysteine-type peptidase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 152 368
IPR013201 Prot_inhib_I29 66 122
No external refs found!