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  5. Sobic.009G017100.2

Sobic.009G017100.2


Description : Unknown function


Gene families : OG_42_0000230 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G017100.2
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
413214 No alias Protein of unknown function (DUF674) 0.02 Orthogroups_2024-Update
Glyma.07G063000 No alias Protein of unknown function (DUF674) 0.03 Orthogroups_2024-Update
HORVU1Hr1G074320.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G108900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR007750 DUF674 4 90
IPR007750 DUF674 191 274
No external refs found!