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  5. At4g02970

At4g02970


Description : Function unknown


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g02970
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
At4g02890 No alias Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8] 0.04 Orthogroups_2024-Update
Bradi1g67552 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Brara.C02747.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Cre11.g467567 No alias polyubiquitin 10 0.01 Orthogroups_2024-Update
GRMZM2G005461 No alias ubiquitin 9 0.03 Orthogroups_2024-Update
Glyma.04G231500 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.03 Orthogroups_2024-Update
HORVU4Hr1G065100.3 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os05g42424 No alias ubiquitin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_100402g0010 No alias (at4g02890 : 582.0) Polyubiquitin gene containing 4... 0.02 Orthogroups_2024-Update
MA_13396g0020 No alias (at5g20620 : 280.0) encodes a ubiquitin polyprotein.;... 0.03 Orthogroups_2024-Update
Mp2g17420.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Seita.1G078800.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Seita.2G321300.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.004G050100.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.004G273300.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G223600.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Solyc11g005650 No alias Ubiquitin family protein (AHRD V3.3 *-* AT4G02890.4) 0.04 Orthogroups_2024-Update
Sopen06g018280 No alias Ribosomal L40e family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 4 72
No external refs found!