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  5. Sobic.009G022500.1

Sobic.009G022500.1


Description : subfamily ABCG transporter & jasmonic acid transporter *(JAT)


Gene families : OG_42_0001141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G022500.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
At5g13580 No alias ABC transporter G family member 6... 0.04 Orthogroups_2024-Update
Brara.J02080.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.02 Orthogroups_2024-Update
Solyc04g010200 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9NPK2_ZOSMR) 0.03 Orthogroups_2024-Update
Sopen04g005380 No alias ABC-2 type transporter 0.04 Orthogroups_2024-Update
Sopen05g033350 No alias ABC-2 type transporter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 405 614
IPR003439 ABC_transporter-like 89 241
No external refs found!