1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.009G031400.1

Sobic.009G031400.1


Description : EC_6.2 ligase forming carbon-sulfur bond


Gene families : OG_42_0000553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000553_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G031400.1
Cluster HCAA Clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G225200 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
PSME_00030532-RA No alias (at4g23850 : 546.0) long-chain acyl-CoA synthetase 4... 0.04 Orthogroups_2024-Update
Potri.002G192400 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Pp1s113_124V6 No alias acyl- synthetase 0.02 Orthogroups_2024-Update
Sopen01g051380 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 58 527
No external refs found!