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  5. Sobic.009G043000.1

Sobic.009G043000.1


Description : F-type thioredoxin *(Trx-F)


Gene families : OG_42_0005133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G043000.1
Cluster HCAA Clusters: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
110708 No alias thioredoxin F2 0.04 Orthogroups_2024-Update
Bradi2g58440 No alias thioredoxin F-type 1 0.04 Orthogroups_2024-Update
Brara.B00652.1 No alias F-type thioredoxin *(Trx-F) 0.02 Orthogroups_2024-Update
Brara.E03564.1 No alias F-type thioredoxin *(Trx-F) 0.03 Orthogroups_2024-Update
Glyma.09G249200 No alias thioredoxin F2 0.03 Orthogroups_2024-Update
LOC_Os01g68480 No alias thioredoxin, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g20740.1 No alias F-type thioredoxin 0.03 Orthogroups_2024-Update
Pp1s273_45V6 No alias thioredoxin f 0.02 Orthogroups_2024-Update
evm.model.contig_3835.2 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00001249.9 No alias (at3g02730 : 80.5) thioredoxin F-type 1 (TRXF1);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 87 187
No external refs found!