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  5. Sobic.009G048300.2

Sobic.009G048300.2


Description : regulatory protein of DNA methylation pathway *(IDN/IDP)


Gene families : OG_42_0000478 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G048300.2
Cluster HCAA Clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_11776 No alias protein involved in de novo 2 0.03 Orthogroups_2024-Update
Bradi2g35460 No alias XH/XS domain-containing protein 0.08 Orthogroups_2024-Update
Bradi2g43797 No alias XH/XS domain-containing protein 0.05 Orthogroups_2024-Update
Brara.G03701.1 No alias Unknown function 0.1 Orthogroups_2024-Update
Potri.001G240732 No alias XH/XS domain-containing protein 0.02 Orthogroups_2024-Update
Sobic.007G043000.1 No alias regulatory protein of DNA methylation pathway *(IDN/IDP) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0031047 gene silencing by RNA IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005379 Uncharacterised_XH 489 618
IPR005381 Znf-XS_domain 38 78
IPR005380 XS_domain 108 212
No external refs found!