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  5. Sobic.009G055900.1

Sobic.009G055900.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G055900.1
Cluster HCAA Clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
441324 No alias FASCICLIN-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
A4A49_01102 No alias fasciclin-like arabinogalactan protein 1 0.03 Orthogroups_2024-Update
A4A49_11805 No alias fasciclin-like arabinogalactan protein 1 0.03 Orthogroups_2024-Update
A4A49_22028 No alias fasciclin-like arabinogalactan protein 2 0.03 Orthogroups_2024-Update
A4A49_40191 No alias fasciclin-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
At2g24450 No alias FLA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W0S4] 0.03 Orthogroups_2024-Update
At3g12660 No alias Fasciclin-like arabinogalactan protein 14... 0.03 Orthogroups_2024-Update
At4g12730 No alias Fasciclin-like arabinogalactan protein 2... 0.05 Orthogroups_2024-Update
Bradi4g34420 No alias FASCICLIN-like arabinogalactan 2 0.03 Orthogroups_2024-Update
Brara.A03323.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G034100.2 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
LOC_Os02g26320 No alias fasciclin-like arabinogalactan precursor protein,... 0.03 Orthogroups_2024-Update
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
PSME_00021473-RA No alias (at2g45470 : 140.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
Potri.001G037800 No alias FASCICLIN-like arabinogalactan protein 14 precursor 0.03 Orthogroups_2024-Update
Potri.014G071700 No alias FASCICLIN-like arabinogalactan-protein 10 0.02 Orthogroups_2024-Update
Seita.6G110400.1 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Solyc01g091530 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc10g005960 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 204 335
No external refs found!