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  5. Sobic.009G056100.1

Sobic.009G056100.1


Description : RNA splicing factor *(RSZ32/33)


Gene families : OG_42_0002115 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G056100.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Pp1s65_286V6 No alias arginine serine-rich splicing 0.03 Orthogroups_2024-Update
Solyc05g054920 No alias Serine/arginine-rich-splicing factor RS2Z32 (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 269 284
IPR001878 Znf_CCHC 291 306
IPR000504 RRM_dom 95 157
IPR000504 RRM_dom 189 250
No external refs found!