Description : RING-H2-class CTL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.009G056500.1 | |
Cluster | HCAA Clusters: Cluster_69 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_09521 | No alias | e3 ubiquitin-protein ligase mbr2 | 0.02 | Orthogroups_2024-Update | |
A4A49_24395 | No alias | e3 ubiquitin-protein ligase mbr2 | 0.02 | Orthogroups_2024-Update | |
Glyma.06G234300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.12G158500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009523 | photosystem II | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
CC | GO:0016459 | myosin complex | IEP | Predicted GO |
CC | GO:0034357 | photosynthetic membrane | IEP | Predicted GO |
CC | GO:0042651 | thylakoid membrane | IEP | Predicted GO |
CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 485 | 527 |
No external refs found! |