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  5. Sobic.009G069700.1

Sobic.009G069700.1


Description : transcriptional repressor *(IAA/AUX)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G069700.1
Cluster HCAA Clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
At1g52830 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178W781] 0.04 Orthogroups_2024-Update
Bradi2g05650 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Brara.J00267.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Seita.3G379400.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Seita.9G162900.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sopen01g040960 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen09g033890 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 49 228
No external refs found!