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  5. Sobic.009G070500.1

Sobic.009G070500.1


Description : Unknown function


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G070500.1
Cluster HCAA Clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
At1g62440 No alias Leucine-rich repeat extensin-like protein 2... 0.03 Orthogroups_2024-Update
GRMZM2G070322 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Glyma.04G035950 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G016710.2 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Pp1s96_30V6 No alias T9E8.80; leucine-rich repeat family protein / extensin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 72 110
IPR001611 Leu-rich_rpt 281 332
IPR001611 Leu-rich_rpt 151 209
No external refs found!