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  5. Sobic.009G106700.1

Sobic.009G106700.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G106700.1
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Bradi1g26810 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Brara.G02669.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
GRMZM2G119496 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
GRMZM2G166459 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.15G107100 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G063430.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
LOC_Os07g01750 No alias MATE efflux family protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s181_24V6 No alias transparent testa 12 0.01 Orthogroups_2024-Update
Seita.5G274000.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Seita.5G333100.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Solyc03g034400 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BFW0_SOLLC) 0.02 Orthogroups_2024-Update
Sopen03g007250 No alias MatE 0.02 Orthogroups_2024-Update
Sopen03g037890 No alias MatE 0.02 Orthogroups_2024-Update
Sopen03g037900 No alias MatE 0.02 Orthogroups_2024-Update
Sopen04g002620 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 256 418
IPR002528 MATE_fam 35 194
No external refs found!