1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.009G118200.1

Sobic.009G118200.1


Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G118200.1
Cluster HCAA Clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Brara.I05294.1 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
GRMZM2G385989 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.03 Orthogroups_2024-Update
Glyma.01G136000 No alias plant VAP homolog 12 0.02 Orthogroups_2024-Update
Solyc01g067720 No alias Vesicle-associated 2-2-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc01g098200 No alias Vesicle-associated protein 1-1 (AHRD V3.3 *** A0A1D1Y4C8_9ARAE) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR000535 MSP_dom 8 103
No external refs found!