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  5. Sobic.009G120800.1

Sobic.009G120800.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G120800.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G133000 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Glyma.05G085200 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Glyma.11G217200 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.18G039500 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G029850.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
LOC_Os05g31620 No alias OsCML15 - Calmodulin-related calcium sensor protein, expressed 0.05 Orthogroups_2024-Update
MA_194997g0010 No alias (at1g24620 : 137.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
MA_51891g0010 No alias (at1g24620 : 152.0) EF hand calcium-binding protein... 0.04 Orthogroups_2024-Update
MA_616616g0010 No alias (at1g24620 : 118.0) EF hand calcium-binding protein... 0.02 Orthogroups_2024-Update
MA_863010g0010 No alias (at1g24620 : 115.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
Pp1s107_171V6 No alias F21J9.28; polcalcin, putative / calcium-binding pollen... 0.02 Orthogroups_2024-Update
Pp1s263_50V6 No alias polcalcin 0.02 Orthogroups_2024-Update
Sopen01g050420 No alias EF hand 0.02 Orthogroups_2024-Update
Sopen02g014430 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 53 112
IPR002048 EF_hand_dom 123 186
No external refs found!