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  5. Sobic.009G130700.1

Sobic.009G130700.1


Description : protein involved in PS-II assembly *(Psb32)


Gene families : OG_42_0006589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G130700.1
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Brara.A02277.1 No alias protein involved in PS-II assembly *(Psb32) 0.03 Orthogroups_2024-Update
Cre03.g182150 No alias thylakoid lumen 18.3 kDa protein 0.02 Orthogroups_2024-Update
GRMZM2G025882 No alias thylakoid lumen 18.3 kDa protein 0.03 Orthogroups_2024-Update
Glyma.10G157100 No alias thylakoid lumen 18.3 kDa protein 0.03 Orthogroups_2024-Update
Glyma.20G231600 No alias thylakoid lumen 18.3 kDa protein 0.03 Orthogroups_2024-Update
Kfl00736_0090 kfl00736_0090_v1.1 (at1g54780 : 253.0) Encodes a thylakoid lumen protein... 0.03 Orthogroups_2024-Update
LOC_Os05g33280 No alias thylakoid lumen protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_10433010g0010 No alias (at1g54780 : 325.0) Encodes a thylakoid lumen protein... 0.02 Orthogroups_2024-Update
Mp8g16080.1 No alias Psb32 protein involved in PS-II assembly 0.03 Orthogroups_2024-Update
Potri.013G026400 No alias thylakoid lumen 18.3 kDa protein 0.04 Orthogroups_2024-Update
Pp1s123_97V6 No alias T22H22.19; thylakoid lumen 18.3 kDa protein [Arabidopsis... 0.02 Orthogroups_2024-Update
Pp1s42_208V6 No alias T22H22.19; thylakoid lumen 18.3 kDa protein [Arabidopsis... 0.03 Orthogroups_2024-Update
Seita.3G249600.1 No alias protein involved in PS-II assembly *(Psb32) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007621 TPM_dom 113 237
No external refs found!