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  5. Sobic.009G141500.1

Sobic.009G141500.1


Description : subgroup ERF-II transcription factor *(ERF19/20)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G141500.1
Cluster HCAA Clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.02 Orthogroups_2024-Update
At5g52020 No alias Ethylene-responsive transcription factor ERF025... 0.03 Orthogroups_2024-Update
Bradi3g41543 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G116700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G138900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G236400 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Glyma.12G103100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G084700 No alias related to AP2 1 0.05 Orthogroups_2024-Update
Glyma.18G262800 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G058940.3 No alias transcription factor component *(HRE/RAP2.12) of... 0.02 Orthogroups_2024-Update
HORVU2Hr1G071270.4 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G080420.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G080790.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os02g38090 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11860 No alias ethylene-responsive transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g28440 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_13408g0010 No alias (at1g21910 : 95.9) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_364562g0010 No alias (at2g25820 : 110.0) encodes a member of the DREB... 0.07 Orthogroups_2024-Update
MA_81979g0010 No alias (at5g21960 : 95.5) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_97319g0010 No alias (at3g16280 : 127.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00005183-RA No alias (at5g47220 : 92.8) Encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
PSME_00041851-RA No alias (at1g21910 : 102.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00057235-RA No alias (at5g11590 : 122.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G154200 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Potri.001G181500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G138700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G138100 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Potri.016G053200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s204_42V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s20_184V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s21_214V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s31_112V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s38_262V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s60_148V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s79_25V6 No alias ap2 erf domain-containing transcription factor 0.04 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G139200.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Seita.9G323300.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G531100.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G238500.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Solyc10g006130 No alias EAR motif SlERF36 0.03 Orthogroups_2024-Update
Sopen06g016040 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen10g028030 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 26 76
No external refs found!