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  5. Sobic.009G147450.1

Sobic.009G147450.1


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G147450.1
Cluster HCAA Clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g45300 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Sobic.004G230650.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G141340.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g121630 No alias Protein FAR1-RELATED SEQUENCE 4 (AHRD V3.3 *** W9QKD5_9ROSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0032392 DNA geometric change IEP Predicted GO
BP GO:0032508 DNA duplex unwinding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 141 233
No external refs found!