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  5. Sobic.009G148300.1

Sobic.009G148300.1


Description : Unknown function


Gene families : OG_42_0000845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G148300.1
Cluster HCAA Clusters: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
79402 No alias Protein of unknown function (DUF668) 0.02 Orthogroups_2024-Update
Bradi2g24380 No alias Protein of unknown function (DUF668) 0.04 Orthogroups_2024-Update
GRMZM2G046846 No alias Protein of unknown function (DUF668) 0.02 Orthogroups_2024-Update
Glyma.06G159200 No alias Protein of unknown function (DUF668) 0.05 Orthogroups_2024-Update
HORVU3Hr1G082170.11 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_209702g0010 No alias (at1g34320 : 217.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Seita.3G232100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc06g065460 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR021864 DUF3475 160 215
IPR007700 DUF668 376 460
No external refs found!