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  5. Sobic.009G157200.1

Sobic.009G157200.1


Description : component *(COI) of jasmonic acid receptor complex


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G157200.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
At2g39940 No alias Coronatine-insensitive protein 1... 0.04 Orthogroups_2024-Update
Bradi1g67160 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g18220 No alias auxin signaling F-box 3 0.04 Orthogroups_2024-Update
Brara.C02040.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
GRMZM2G135978 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G254300 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G209400 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G189800 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G100200 No alias auxin signaling F-box 3 0.02 Orthogroups_2024-Update
LOC_Os02g52230 No alias coronatine-insensitive protein 1, putative, expressed 0.04 Orthogroups_2024-Update
MA_121693g0010 No alias (at5g49980 : 727.0) auxin F-box protein 5 (AFB5);... 0.02 Orthogroups_2024-Update
MA_47869g0020 No alias (at4g24390 : 219.0) RNI-like superfamily protein; BEST... 0.03 Orthogroups_2024-Update
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.03 Orthogroups_2024-Update
PSME_00010803-RA No alias (at2g39940 : 593.0) Encodes a protein containing... 0.03 Orthogroups_2024-Update
PSME_00010963-RA No alias (at5g49980 : 733.0) auxin F-box protein 5 (AFB5);... 0.03 Orthogroups_2024-Update
PSME_00024313-RA No alias (at5g49980 : 738.0) auxin F-box protein 5 (AFB5);... 0.03 Orthogroups_2024-Update
Potri.008G064400 No alias RNI-like superfamily protein 0.05 Orthogroups_2024-Update
Pp1s12_347V6 No alias coronitine insensitive 1 0.02 Orthogroups_2024-Update
Pp1s24_60V6 No alias coronitine insensitive 1 0.03 Orthogroups_2024-Update
Sobic.006G056000.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.05 Orthogroups_2024-Update
Solyc02g079190 No alias TRANSPORT INHIBITOR RESPONSE 1 protein, putative (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!