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  5. Sobic.009G162300.1

Sobic.009G162300.1


Description : lignin laccase & EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G162300.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
404333 No alias laccase 12 0.02 Orthogroups_2024-Update
A4A49_01901 No alias laccase-15 0.03 Orthogroups_2024-Update
GRMZM2G072808 No alias laccase 17 0.03 Orthogroups_2024-Update
HORVU7Hr1G083090.4 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 40 153
IPR001117 Cu-oxidase 166 324
IPR011706 Cu-oxidase_2 440 567
No external refs found!