Sobic.009G163800.1

Description : component *(eL36) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.009G163800.1
Cluster	HCAA Clusters: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
267958	No alias	Ribosomal protein L36e family protein	0.08	Orthogroups_2024-Update
439710	No alias	Ribosomal protein L36e family protein	0.1	Orthogroups_2024-Update
At2g37600	No alias	60S ribosomal protein L36-1...	0.1	Orthogroups_2024-Update
At3g53740	No alias	60S ribosomal protein L36...	0.02	Orthogroups_2024-Update
Bradi2g23260	No alias	Ribosomal protein L36e family protein	0.15	Orthogroups_2024-Update
Brara.C01889.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.25	Orthogroups_2024-Update
Brara.D02287.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.17	Orthogroups_2024-Update
Brara.E00749.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.23	Orthogroups_2024-Update
Brara.G01608.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Brara.I03660.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Cre12.g484050	No alias	Ribosomal protein L36e family protein	0.26	Orthogroups_2024-Update
GRMZM5G850966	No alias	Ribosomal protein L36e family protein	0.1	Orthogroups_2024-Update
Glyma.10G233900	No alias	Ribosomal protein L36e family protein	0.08	Orthogroups_2024-Update
Glyma.19G047300	No alias	Ribosomal protein L36e family protein	0.06	Orthogroups_2024-Update
HORVU1Hr1G072270.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.15	Orthogroups_2024-Update
HORVU3Hr1G086410.2	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
HORVU5Hr1G009610.2	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Kfl00110_0150	kfl00110_0150_v1.1	(at2g37600 : 143.0) Ribosomal protein L36e family...	0.06	Orthogroups_2024-Update
LOC_Os05g38520	No alias	60S ribosomal protein L36-2, putative, expressed	0.04	Orthogroups_2024-Update
MA_10430792g0010	No alias	(at3g53740 : 140.0) Ribosomal protein L36e family...	0.05	Orthogroups_2024-Update
MA_24782g0010	No alias	(at3g53740 : 142.0) Ribosomal protein L36e family...	0.07	Orthogroups_2024-Update
MA_69756g0010	No alias	(at2g37600 : 123.0) Ribosomal protein L36e family...	0.03	Orthogroups_2024-Update
Mp1g05460.1	No alias	component RPL36 of LSU proteome component	0.08	Orthogroups_2024-Update
PSME_00032528-RA	No alias	(at3g53740 : 137.0) Ribosomal protein L36e family...	0.14	Orthogroups_2024-Update
PSME_00032530-RA	No alias	(at3g53740 : 141.0) Ribosomal protein L36e family...	0.11	Orthogroups_2024-Update
PSME_00049847-RA	No alias	(at3g53740 : 141.0) Ribosomal protein L36e family...	0.04	Orthogroups_2024-Update
Potri.004G057000	No alias	Ribosomal protein L36e family protein	0.03	Orthogroups_2024-Update
Potri.012G142600	No alias	Ribosomal protein L36e family protein	0.1	Orthogroups_2024-Update
Pp1s249_65V6	No alias	60s ribosomal protein l36-2	0.21	Orthogroups_2024-Update
Pp1s34_151V6	No alias	60s ribosomal protein l36-2	0.11	Orthogroups_2024-Update
Pp1s84_102V6	No alias	60s ribosomal protein l36-2	0.17	Orthogroups_2024-Update
Seita.3G217000.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Seita.5G376500.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Solyc03g025520	No alias	60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC)	0.22	Orthogroups_2024-Update
Solyc06g036050	No alias	60S ribosomal protein L36 (AHRD V3.3 *** K4C4X4_SOLLC)	0.12	Orthogroups_2024-Update
Sopen01g038370	No alias	Ribosomal protein L36e	0.04	Orthogroups_2024-Update
Sopen03g004360	No alias	Ribosomal protein L36e	0.17	Orthogroups_2024-Update
Sopen06g011800	No alias	Ribosomal protein L36e	0.13	Orthogroups_2024-Update
evm.model.contig_3387.3	No alias	(at2g37600 : 125.0) Ribosomal protein L36e family...	0.03	Orthogroups_2024-Update
evm.model.tig00021493.69	No alias	(at2g37600 : 127.0) Ribosomal protein L36e family...	0.16	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004017	adenylate kinase activity	IEP	Predicted GO
MF	GO:0004827	proline-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006486	protein glycosylation	IEP	Predicted GO
BP	GO:0006487	protein N-linked glycosylation	IEP	Predicted GO
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Predicted GO
BP	GO:0009607	response to biotic stimulus	IEP	Predicted GO
BP	GO:0009617	response to bacterium	IEP	Predicted GO
BP	GO:0009620	response to fungus	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Predicted GO
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predicted GO
BP	GO:0018196	peptidyl-asparagine modification	IEP	Predicted GO
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0042742	defense response to bacterium	IEP	Predicted GO
BP	GO:0043207	response to external biotic stimulus	IEP	Predicted GO
BP	GO:0043413	macromolecule glycosylation	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Predicted GO
BP	GO:0050832	defense response to fungus	IEP	Predicted GO
BP	GO:0051704	multi-organism process	IEP	Predicted GO
BP	GO:0051707	response to other organism	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO
BP	GO:0098542	defense response to other organism	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000509	Ribosomal_L36e	8	101

External Links

No external refs found!

Sobic.009G163800.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation