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  5. Sobic.009G165600.1

Sobic.009G165600.1


Description : component *(NRPD9) of RNA polymerase IV complex & component *(NRPB9) of RNA polymerase II complex & component *(NRPE9) of RNA polymerase V complex


Gene families : OG_42_0002136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G165600.1
Cluster HCAA Clusters: Cluster_12


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
BP GO:0006351 transcription, DNA-templated IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001529 DNA-dir_RNA_pol_M/15kDasu 4 34
IPR001222 Znf_TFIIS 75 113
No external refs found!